BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C03SP1|AL425087
(693 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1374 1352 0.0
>3x_Contig1374
Length = 8985
Score = 1352 bits (682), Expect = 0.0
Identities = 691/693 (99%), Gaps = 1/693 (0%)
Strand = Plus / Plus
Query: 1 gatccacctgtaaatctggaccatacatcctgatgtggatcaaaatacacgtacatatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8025 gatccacctgtaaatctggaccatacatcctgatgtggatcaaaatacacgtacatatca 8084
Query: 61 ccgatttcatatattttcaatagaacttgacgtacgtactcaatgtactcaaaatcgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8085 ccgatttcatatattttcaatagaacttgacgtacgtactcaatgtactcaaaatcgtac 8144
Query: 121 tgccctggacccttatgctccaatgcttcccaattaaaacagaatcgaatggtattatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8145 tgccctggacccttatgctccaatgcttcccaattaaaacagaatcgaatggtattatac 8204
Query: 181 cccatcgacttcaatctagtaatatgttcatttacttcatcaatgtcgataggatggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8205 cccatcgacttcaatctagtaatatgttcatttacttcatcaatgtcgataggatggttt 8264
Query: 241 acaaagtatcgcatcatctgctgaatcccaaaatgagtcaagtaacggagagtgcgaagt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8265 acaaagt-tcgcatcatctgctgaatcccaaaatgagtcaagtaacggagagtgcgaagt 8323
Query: 301 tacggttggtgaattcgggtatttgacgcatggatccaagttcactccacgaagttgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8324 tacggttggtgaattcgggtatttgacgcatggatccaagttcactccacgaagttgtac 8383
Query: 361 cacacgatcatgagagtcaatgaactccccttcagaagacactcggattttttcaagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8384 cacacgatcatgagagtcaatgaactccccttcagaagacactcggattttttcaagaac 8443
Query: 421 cattttcacggaaaaggaatgacaagtgcctcagtggtttcaagtccggataggtgatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8444 cattttcacggaaaaggaatgacaagtgcctcagtggtttcaagtccggataggtgatat 8503
Query: 481 cggatgctgaattactatctcaacgcccctaataaaacctggatctaacttgattgaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8504 cggatgctgaattactatctcaacgcccctaataaaacctggatctaacttgattgaaac 8563
Query: 541 tggattgaaaacgagtgaattttccagctaagtattattgaaaagattgataatcacttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8564 tggattgaaaacgagtgaattttccagctaagtattattgaaaagattgataatcacttc 8623
Query: 601 acccacacaattggtgctctgaatatgtatgtttgaaccaaggctcaagctttctgccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8624 acccacacaattggtgctctgaatatgtatgtttgaaccaaggctcaagctttctgccag 8683
Query: 661 gtgaaacaagtgtaacgntgtctatatatatat 693
||||||||||||||||| |||||||||||||||
Sbjct: 8684 gtgaaacaagtgtaacgttgtctatatatatat 8716
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6848
Number of Sequences: 1807
Number of extensions: 6848
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 693
length of database: 10,358,551
effective HSP length: 16
effective length of query: 677
effective length of database: 10,329,639
effective search space: 6993165603
effective search space used: 6993165603
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)